International Tables for Crystallography (2012). Vol. F, ch. 22.1, pp. 703-712   | 1 | 2 |
https://doi.org/10.1107/97809553602060000885

Chapter 22.1. Protein geometry: volumes, areas and distances

Chapter index

Atomic radii 22.1.4
standard 22.1.4.1
van der Waals 22.1.4.1
Cambridge Structural Database (CSD)
van der Waals radii 22.1.4.1
Contact surface 22.1.3.3.3
Convex hull 22.1.3.2
Delaunay triangulation 22.1.2.4
Molecular packing
efficiency 22.1.5.1
measurement of 22.1.5
Molecular surface 22.1.3.3.3
Molecular volumes 22.1.1, 22.1.2
Delaunay triangulation 22.1.2.4
Voronoi construction 22.1.2.1, 22.1.2.2
Packing coefficient 22.1.5.1
Packing density 22.1.5.1
Packing efficiency 22.1.5.1
Probe radius 22.1.4.2, 22.1.4.2
Probe sphere 22.1.3.3
Re-entrant surface 22.1.3.3.3
Solvent-accessible surface 22.1.3.3.2
Standard atomic radii 22.1.4.1
Standard atomic volumes 22.1.5.2
Standard residue volumes 22.1.5.1
Surface areas 22.1.1
Surfaces
contact surface 22.1.3.3.3
convex hull 22.1.3.2
definitions of 22.1.3
molecular surface 22.1.3.3.3
probe sphere 22.1.3.3
re-entrant surface 22.1.3.3.3
solvent-accessible surface 22.1.3.3.2
van der Waals surface 22.1.3.3.1
Voronoi polyhedra 22.1.3.2
Unified-atom approach 22.1.4.1
van der Waals radii 22.1.4.1
from the CSD 22.1.4.1
van der Waals surface 22.1.3.3.1
Vertex error 22.1.2.3.2
Voronoi construction 22.1.2.2
Voronoi polyhedra 22.1.2.1
and surfaces 22.1.3.2
chopping-down method 22.1.2.3.3
for proteins 22.1.2.3
method B 22.1.2.3.1
radical-plane method 22.1.2.3.4
ratio method 22.1.2.3.1
vertex error 22.1.2.3.2