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 Results for DC.creator="J." AND DC.creator="Richelle" in section 21.2.2 of volume F
Deviations from standard atomic volumes as a quality measure for protein crystal structures
Wodak, S. J., Vagin, A. A., Richelle, J., Das, U., Pontius, J. and Berman, H. M.  International Tables for Crystallography (2012). Vol. F, Section 21.2.2.2.3, pp. 664-665 [ doi:10.1107/97809553602060000880 ]
... of the dividing plane P between two atoms i and j, with van der Waals radii and , respectively, separated by a ... CAD): a robust measure to evaluate accuracy of protein models. J. Mol. Biol. 268, 678-685. Alard, P. (1991). Calcul ... macromolécules. PhD thesis dissertation, Université Libre de Bruxelles, Belgium. Finney, J. L. (1975). Volume occupation, environment and accessibility in ...

Validation using knowledge-based interaction potentials and profiles
Wodak, S. J., Vagin, A. A., Richelle, J., Das, U., Pontius, J. and Berman, H. M.  International Tables for Crystallography (2012). Vol. F, Section 21.2.2.2.2, pp. 663-664 [ doi:10.1107/97809553602060000880 ]
... volume-based Z scores. References Eisenberg, D., Luthy, R. & Bowie, J. U. (1997). VERIFY3D: assessment of protein models with three ... . Novel knowledge-based mean force potential at atomic level. J. Mol. Biol. 267, 207-222. Melo, F. & Feytmans, E. (1998 ... Assessing protein structures with a non-local atomic interaction energy. J. Mol. Biol. 277, 1141-1152. Sippl, M. J. (1990) ...

Validation of stereochemical and non-bonded parameters
Wodak, S. J., Vagin, A. A., Richelle, J., Das, U., Pontius, J. and Berman, H. M.  International Tables for Crystallography (2012). Vol. F, Section 21.2.2.2.1, p. 663 [ doi:10.1107/97809553602060000880 ]
... bonded and geometrical features. Biopolymers, 22, 2577-2637. Kleywegt, G. J. & Jones, T. A. (1996). Phi/psi-chology: Ramachandran revisited. ... Laskowski, R. A., MacArthur, M. W., Moss, D. S. & Thornton, J. M. (1993). PROCHECK: a program to check the stereochemical quality of protein structures. J. Appl. Cryst. 26, 283-291. Morris, A. L., MacArthur, ...

Comparisons against standard values derived from surveys of other macromolecules
Wodak, S. J., Vagin, A. A., Richelle, J., Das, U., Pontius, J. and Berman, H. M.  International Tables for Crystallography (2012). Vol. F, Section 21.2.2.2, pp. 663-665 [ doi:10.1107/97809553602060000880 ]
... of the dividing plane P between two atoms i and j, with van der Waals radii and , respectively, separated by a ... CAD): a robust measure to evaluate accuracy of protein models. J. Mol. Biol. 268, 678-685. Alard, P. (1991). Calcul ... Université Libre de Bruxelles, Belgium. Eisenberg, D., Luthy, R. & Bowie, J. U. (1997). VERIFY3D: assessment of protein models with ...

Comparisons against standard values derived from crystals of small molecules
Wodak, S. J., Vagin, A. A., Richelle, J., Das, U., Pontius, J. and Berman, H. M.  International Tables for Crystallography (2012). Vol. F, Section 21.2.2.1, pp. 662-663 [ doi:10.1107/97809553602060000880 ]
... Peters, B. G., Kennard, O., Motherwell, W. D. S., Rodgers, J. R. & Watson, D. G. (1979). The Cambridge Crystallographic Data ... Berman, H. M., Olson, W. K., Beveridge, D. L., Westbrook, J., Gelbin, A., Demeny, T., Hsieh, S.-H., Srinivasan, A. R. ... relational database of three-dimensional structures of nucleic acids. Biophys. J. 63, 751-759. Berman, H. M., Westbrook, J., Feng, ...

Validating the geometric and stereochemical parameters of the model
Wodak, S. J., Vagin, A. A., Richelle, J., Das, U., Pontius, J. and Berman, H. M.  International Tables for Crystallography (2012). Vol. F, Section 21.2.2, pp. 662-665 [ doi:10.1107/97809553602060000880 ]
... of the dividing plane P between two atoms i and j, with van der Waals radii and , respectively, separated by a ... CAD): a robust measure to evaluate accuracy of protein models. J. Mol. Biol. 268, 678-685. Alard, P. (1991). Calcul ... Peters, B. G., Kennard, O., Motherwell, W. D. S., Rodgers, J. R. & Watson, D. G. (1979). The Cambridge Crystallographic ...

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